[Gmsh] Fwd: Bug#607875: gmsh: Segmentation fault when creating 3d mesh
Christophe Geuzaine
cgeuzaine at ulg.ac.be
Fri Jun 10 09:41:37 CEST 2011
This is fixed in SVN r9429.
Thanks for the report!
On 24/12/10 10:42, Christophe Prud'homme wrote:
> FYI
>
> ---------- Forwarded message ----------
> From: *Torquil Macdonald Sørensen* <torquil at gmail.com
> <mailto:torquil at gmail.com>>
> Date: Thu, Dec 23, 2010 at 2:10 PM
> Subject: Bug#607875: gmsh: Segmentation fault when creating 3d mesh
> To: Debian Bug Tracking System <submit at bugs.debian.org
> <mailto:submit at bugs.debian.org>>
>
>
> Package: gmsh
> Version: 2.5.0.dfsg-2
> Severity: important
>
> Gmsh segfaults when I ask it to generate a 3d mesh. I have attached a
> *.geo.gz file which has a 3d arc with a defined volume.
>
> To reproduce the segfault, just open it in Gmsh, select "Mesh" in the
> drop-down
> menu, then click on "3D".
>
> Gmsh segfaults with the following message on the terminal:
>
> asus:14614] *** Process received signal ***
> [asus:14614] Signal: Segmentation fault (11)
> [asus:14614] Signal code: Address not mapped (1)
> [asus:14614] Failing at address: 0xfffffff59bd28358
> [asus:14614] [ 0] /lib/libpthread.so.0(+0xef60) [0x7f4f961c3f60]
> [asus:14614] [ 1] gmsh() [0x6e94e0]
> [asus:14614] [ 2] gmsh(_ZN9meshGFaceclEP5GFace+0x20a) [0x6e6a1a]
> [asus:14614] [ 3] gmsh(_Z12GenerateMeshP6GModeli+0x626) [0x6c81f6]
> [asus:14614] [ 4] gmsh(_ZN6GModel4meshEi+0x9) [0x5f5e79]
> [asus:14614] [ 5] gmsh(_Z10mesh_3d_cbP9Fl_WidgetPv+0x1b) [0x8537db]
> [asus:14614] [ 6]
> /usr/lib/libfltk.so.1.1(_ZN9Fl_Widget11do_callbackEv+0xb) [0x7f4fa0137d3b]
> [asus:14614] [ 7] /usr/lib/libfltk.so.1.1(_ZN9Fl_Button6handleEi+0x160)
> [0x7f4fa0138340]
> [asus:14614] [ 8] /usr/lib/libfltk.so.1.1(+0x3231a) [0x7f4fa013131a]
> [asus:14614] [ 9]
> /usr/lib/libfltk.so.1.1(_ZN2Fl6handleEiP9Fl_Window+0x4dc) [0x7f4fa013247c]
> [asus:14614] [10] /usr/lib/libfltk.so.1.1(_Z9fl_handleRK7_XEvent+0x85)
> [0x7f4fa0178465]
> [asus:14614] [11] /usr/lib/libfltk.so.1.1(+0x7a683) [0x7f4fa0179683]
> [asus:14614] [12] /usr/lib/libfltk.so.1.1(_Z7fl_waitd+0x425)
> [0x7f4fa0179ef5]
> [asus:14614] [13] /usr/lib/libfltk.so.1.1(_ZN2Fl4waitEd+0x127)
> [0x7f4fa0132e97]
> [asus:14614] [14] /usr/lib/libfltk.so.1.1(_ZN2Fl3runEv+0x1d)
> [0x7f4fa0132fcd]
> [asus:14614] [15] gmsh(_Z8GmshFLTKiPPc+0x34b) [0x51244b]
> [asus:14614] [16] gmsh(main+0xac) [0x511a9c]
> [asus:14614] [17] /lib/libc.so.6(__libc_start_main+0xfd) [0x7f4f95e72c4d]
> [asus:14614] [18] gmsh() [0x511929]
> [asus:14614] *** End of error message ***
> Segmentation fault
>
> Best regards
> Torquil Sørensen
>
> -- System Information:
> Debian Release: 6.0
> APT prefers unstable
> APT policy: (500, 'unstable'), (1, 'experimental')
> Architecture: amd64 (x86_64)
>
> Kernel: Linux 2.6.36.2 (SMP w/2 CPU cores)
> Locale: LANG=en_GB.UTF-8, LC_CTYPE=en_GB.UTF-8 (charmap=UTF-8)
> Shell: /bin/sh linked to /bin/dash
>
> Versions of packages gmsh depends on:
> ii dpkg 1.15.8.7 Debian package management
> system
> ii install-info 4.13a.dfsg.1-6 Manage installed
> documentation in
> ii libatlas3gf-base [libla 3.8.3-29 Automatically Tuned Linear
> Algebra
> ii libblas3gf [libblas.so. 1.2-8 Basic Linear Algebra
> Reference imp
> ii libc6 2.11.2-7 Embedded GNU C Library:
> Shared lib
> ii libcgns2 2.5.4-3 CFD General Notation System
> librar
> ii libfltk1.1 1.1.10-2+b1 Fast Light Toolkit - shared
> librar
> ii libgcc1 1:4.4.5-10 GCC support library
> ii libgfortran3 4.4.5-10 Runtime library for GNU
> Fortran ap
> ii libgl1-mesa-glx [libgl1 7.7.1-4 A free implementation of
> the OpenG
> ii libglu1-mesa [libglu1] 7.7.1-4 The OpenGL utility library
> (GLU)
> ii libgomp1 4.4.5-10 GCC OpenMP (GOMP) support
> library
> ii libjpeg62 6b1-1 The Independent JPEG
> Group's JPEG
> ii liblapack3gf [liblapack 3.2.2-1.2 library of linear algebra
> routines
> ii libopencascade-foundati 6.3.0.dfsg.1-6 OpenCASCADE CAE platform
> shared li
> ii libopencascade-modeling 6.3.0.dfsg.1-6 OpenCASCADE CAE platform
> shared li
> ii libopenmpi1.3 1.4.3-1 high performance message
> passing l
> ii libpng12-0 1.2.44-1 PNG library - runtime
> ii libscotch-5.1 5.1.8a.dfsg-2 programs and libraries for
> graph,
> ii libstdc++6 4.4.5-10 The GNU Standard C++ Library v3
> ii libx11-6 2:1.3.3-4 X11 client-side library
> ii zlib1g 1:1.2.3.4.dfsg-3 compression library - runtime
>
> Versions of packages gmsh recommends:
> ii mpi-default-bin 0.6 Standard MPI runtime programs
>
> gmsh suggests no packages.
>
> -- no debconf information
>
> --
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> debian-science-maintainers at lists.alioth.debian.org
> <mailto:debian-science-maintainers at lists.alioth.debian.org>
> http://lists.alioth.debian.org/mailman/listinfo/debian-science-maintainers
>
>
>
>
> --
> Debian Developer - member of Debian Science
> http://wiki.debian.org/DebianScience
> Prof. at Univ. Grenoble in Applied Math.
> http://ljk.imag.fr/membres/Christophe.Prudhomme/
>
>
>
> _______________________________________________
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> gmsh at geuz.org
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--
Prof. Christophe Geuzaine
University of Liege, Electrical Engineering and Computer Science
http://www.montefiore.ulg.ac.be/~geuzaine