[Gmsh] Singular value decomposition requires LAPACK
Vadivelan C
vc at tetrahedrix.com
Tue Jun 2 10:16:54 CEST 2009
I have attached the config.log file.
- Ranjith
On Tue, Jun 2, 2009 at 1:44 PM, David Colignon <David.Colignon at ulg.ac.be>wrote:
> Can you send us your config.log file ?
>
> Dave
>
> --
> David Colignon, Ph.D.
> Collaborateur Logistique du F.R.S.-FNRS
> CÉCI - Consortium des Équipements de Calcul Intensif
> ACE - Applied & Computational Electromagnetics
> Sart-Tilman B28
> Université de Liège
> 4000 Liège - BELGIQUE
> Tél: +32 (0)4 366 37 32
> Fax: +32 (0)4 366 29 10
> WWW: http://hpc.montefiore.ulg.ac.be/
> Agenda:
> http://www.google.com/calendar/embed?src=david.colignon%40gmail.com
>
>
>
> Vadivelan C wrote:
>
>> Hi Dave,
>>
>> Thanks for your quick reply. BTW, i have installed lapack, blas libraries
>> using yum. I have checked
>>
>> [velan at scram ~]$ ls /usr/lib/{*lapack*,*blas.*}
>> -rw-r--r-- 1 root root 5.6M 2008-07-08 22:58 /usr/lib/liblapack.a
>> -rw-r--r-- 1 root root 483K 2008-07-08 22:58 /usr/lib/libblas.a
>> -rwxr-xr-x 1 root root 4.0M 2008-07-08 22:58 /usr/lib/liblapack.so.3.1.1
>> -rw-r--r-- 1 root root 6.1M 2008-07-08 22:58 /usr/lib/liblapack_pic.a
>> -rwxr-xr-x 1 root root 354K 2008-07-08 22:58 /usr/lib/libblas.so.3.1.1
>> -rwxr-xr-x 1 root root 221K 2008-09-16 13:25 /usr/lib/libgslcblas.so.0.0.0
>> lrwxrwxrwx 1 root root 20 2009-05-31 19:51 /usr/lib/libgslcblas.so.0 ->
>> libgslcblas.so.0.0.0
>> lrwxrwxrwx 1 root root 16 2009-06-02 11:21 /usr/lib/libblas.so.3.1 ->
>> libblas.so.3.1.1
>> lrwxrwxrwx 1 root root 16 2009-06-02 11:21 /usr/lib/libblas.so.3 ->
>> libblas.so.3.1.1
>> lrwxrwxrwx 1 root root 18 2009-06-02 11:21 /usr/lib/liblapack.so.3.1 ->
>> liblapack.so.3.1.1
>> lrwxrwxrwx 1 root root 18 2009-06-02 11:21 /usr/lib/liblapack.so.3 ->
>> liblapack.so.3.1.1
>> lrwxrwxrwx 1 root root 18 2009-06-02 11:21 /usr/lib/liblapack.so ->
>> liblapack.so.3.1.1
>> lrwxrwxrwx 1 root root 16 2009-06-02 11:21 /usr/lib/libblas.so ->
>> libblas.so.3.1.1
>>
>> Which shows, lapack library was installed. During gmsh installation i have
>> done following steps
>>
>> ./configure --prefix=/home/soft/gmsh-2.3.1
>> --with-blas-lapack-prefix=/usr/lib/
>>
>> But still i am getting those errors. Can you tell me how to find whether
>> lapack/blas libraries was configured during gmsh installation. I couldnt
>> find anything on config.status files.
>>
>> Thanks
>> - Ranjith
>>
>> On Tue, Jun 2, 2009 at 12:56 PM, David Colignon <David.Colignon at ulg.ac.be<mailto:
>> David.Colignon at ulg.ac.be>> wrote:
>>
>> Hi,
>>
>> it just means that you have to install the lapack library or that
>> the library was not found at the ./configure step when you compiled
>> gmsh.
>>
>> Cheers,
>>
>> Dave
>>
>> -- David Colignon, Ph.D.
>> Collaborateur Logistique du F.R.S.-FNRS
>> CÉCI - Consortium des Équipements de Calcul Intensif
>> ACE - Applied & Computational Electromagnetics
>> Sart-Tilman B28
>> Université de Liège
>> 4000 Liège - BELGIQUE
>> Tél: +32 (0)4 366 37 32
>> Fax: +32 (0)4 366 29 10
>> WWW: http://hpc.montefiore.ulg.ac.be/
>> Agenda:
>> http://www.google.com/calendar/embed?src=david.colignon%40gmail.com
>>
>>
>>
>> Vadivelan C wrote:
>>
>> Hi
>>
>> I'm newbie to gmsh package. I installed gmsh without any
>> problem. I tried to work on tutorials. I got the error message
>> when i load tutorial/t5.geo
>>
>>
>> Info : -------------------------------------------------------
>> Info : Gmsh version : 2.3.1
>> Info : Build OS : Linux
>> Info : Build options : Fltk TreeBrowser Jpeg Png Ann Gmm
>> Chaco Metis Netgen MathEval Libz
>> Info : Build date : Tue Jun 2 11:23:42 IST 2009
>> Info : Build host : scram
>> Info : Packager : root
>> Info : Home directory : /home/velan/
>> Info : Launch date : Tue Jun 2 11:33:18 2009
>> Info : Command line : gmsh
>> Info : -------------------------------------------------------
>> Info : Reading
>> '/home/velan/Download/PACKAGE/gmsh-2.3.1/tutorial/t5.geo'
>> Hole 1 (center = {0.166,0.75,0.166}, radius = 0.09) has number 69!
>> Hole 2 (center = {0.332,0.75,0.332}, radius = 0.09) has number 99!
>> Hole 3 (center = {0.498,0.75,0.498}, radius = 0.09) has number 129!
>> Hole 4 (center = {0.664,0.75,0.664}, radius = 0.09) has number 159!
>> Hole 5 (center = {0.83,0.75,0.83}, radius = 0.09) has number 189!
>> Error : Singular value decomposition requires LAPACK
>> Error : Singular value decomposition requires LAPACK
>> Error : Singular value decomposition requires LAPACK
>> Error : Singular value decomposition requires LAPACK
>> Error : Singular value decomposition requires LAPACK
>> Error : Singular value decomposition requires LAPACK
>> Error : Singular value decomposition requires LAPACK
>> Error : Singular value decomposition requires LAPACK
>> Error : Singular value decomposition requires LAPACK
>>
>>
>> Please let me know if you have any idea about this error message.
>>
>> - Ranjith
>>
>>
>>
>> ------------------------------------------------------------------------
>>
>> _______________________________________________
>> gmsh mailing list
>> gmsh at geuz.org <mailto:gmsh at geuz.org>
>> http://www.geuz.org/mailman/listinfo/gmsh
>>
>>
>>
>>
>
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://www.geuz.org/pipermail/gmsh/attachments/20090602/3472e088/attachment.html>
-------------- next part --------------
A non-text attachment was scrubbed...
Name: config.log
Type: application/octet-stream
Size: 21879 bytes
Desc: not available
URL: <http://www.geuz.org/pipermail/gmsh/attachments/20090602/3472e088/attachment.log>